MLOC_25820 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.357336.74614.821090
LEAShoots from the seedlings (10 cm shoot stage)19.220121.69414.701220
INF1Young developing inflorescences (5mm)5.295698.76546.495590
INF2Developing inflorescences (1-1.5 cm)3.288533.38511.804750
ROORoots from the seedlings (10 cm shoot stage)18.236613.172.703550
NODDeveloping tillers at six leaf stage, 3rd internode5.7251.669841.007760
CAR5Developing grain, bracts removed (5 DPA)1.746931.541243.454180
CAR15Developing grain, bracts removed (15 DPA)1.3385201.096850



CDS Structure of MLOC_25820






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250579.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250579.1CUST_18873_PI427708080NoneNoneNone
MLOC_1385.1NoneAvailableAvailablecontig_112119 (Mapped)
MLOC_25819.1NoneAvailableNonecontig_171528 (Mapped)
MLOC_25820.1NoneAvailableNonecontig_171528 (Mapped)
MLOC_29599.1NoneAvailableNonecontig_201960 (Mapped)
MLOC_79753.1NoneAvailableNonecontig_86792 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----