- Predicted Gene MLOC_25808
MLOC_25808 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.130668 | 0 | 0 | 0.0913122 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.5108 | 16.1437 | 12.5667 | 15.9057 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.733231 | 0.714024 | 0.733653 | 1.91071 |
CDS Structure of MLOC_25808
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g52190.1 |
+2 |
4e-28 |
117 |
107/380 (28%) |
13101.m05459 protein aspartic proteinase nepenthesin precursor, putative |
| TAIR PP10 |
AT2G42980.1 |
+2 |
4e-22 |
100 |
105/383 (27%) |
Eukaryotic aspartyl protease family protein | chr2:17875005-17876588 REVERSE LENGTH=527 |