- Predicted Gene MLOC_25762
MLOC_25762 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.2533 | 55.1721 | 44.9962 | 26.3339 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 51.7514 | 46.4758 | 34.095 | 24.3408 |
| INF1 | Young developing inflorescences (5mm) | 35.5297 | 30.3374 | 28.0279 | 15.6378 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.062 | 17.5315 | 17.2171 | 11.5843 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.6337 | 50.0941 | 46.07 | 30.7025 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 53.629 | 24.8556 | 27.6118 | 58.1261 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 34.7887 | 37.6579 | 37.4663 | 21.2429 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.5558 | 9.85725 | 11.9217 | 14.4358 |
CDS Structure of MLOC_25762
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25762.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g16040.1 |
+2 |
1e-60 |
206 |
109/135 (81%) |
13107.m01679 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed |
| TAIR PP10 |
AT1G72190.1 |
+2 |
9e-38 |
142 |
76/120 (63%) |
D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:27167458-27169696 REVERSE LENGTH=373 |