MLOC_25741 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.834420.430828.355121.4426
LEAShoots from the seedlings (10 cm shoot stage)22.68189.1778319.635512.3846
INF1Young developing inflorescences (5mm)11.498811.601816.56068.09727
INF2Developing inflorescences (1-1.5 cm)11.36111.115811.19349.57005
ROORoots from the seedlings (10 cm shoot stage)59.581226.401920.742629.8228
NODDeveloping tillers at six leaf stage, 3rd internode31.997831.463621.82180.2287
CAR5Developing grain, bracts removed (5 DPA)24.09122.946724.348116.944
CAR15Developing grain, bracts removed (15 DPA)17.21612.867514.923425.8248



CDS Structure of MLOC_25741






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25741.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25741.2CUST_11844_PI427708083AvailableAvailablecontig_1710282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64760.1 +3 1e-45 160 109/112 (97%) 13101.m06980 protein Yip1 domain containing protein, expressed
TAIR PP10 AT4G30260.1 +3 8e-45 157 102/112 (91%) Integral membrane Yip1 family protein | chr4:14816890-14818722 REVERSE LENGTH=280