- Predicted Gene MLOC_25717
MLOC_25717 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_25717_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_25717_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.700679 | 0 | 0.143094 | 0.378013 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.362521 | 0 | 0.588596 |
INF1 | Young developing inflorescences (5mm) | 0.0902636 | 0.097822 | 0.113713 | 0.0909953 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.866594 | 0.763768 | 0.0306722 | 2.06231 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.100475 | 0.0926708 | 0 | 0.1076 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0.132389 |
CDS Structure of MLOC_25717
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25717.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g08260.4 |
+2 |
4e-45 |
157 |
77/115 (67%) |
13112.m00872 protein dehydrogenase E1 component domain containing protein, expressed |
TAIR PP10 |
AT1G21400.1 |
+2 |
3e-24 |
99 |
48/110 (44%) |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:7493492-7496240 FORWARD LENGTH=472 |