- Predicted Gene MLOC_25561
MLOC_25561 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 195.584 | 226.515 | 221.33 | 235.213 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 82.399 | 35.5436 | 20.1084 | 40.754 |
| INF1 | Young developing inflorescences (5mm) | 99.6095 | 84.7019 | 94.8822 | 88.0123 |
| INF2 | Developing inflorescences (1-1.5 cm) | 61.6721 | 49.7194 | 54.5006 | 66.51 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 77.0282 | 114.861 | 113.179 | 138.908 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 173.717 | 87.4996 | 144.442 | 308.23 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 128.773 | 116.37 | 130.596 | 137.201 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.0553 | 7.04775 | 3.50671 | 19.0859 |
CDS Structure of MLOC_25561
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25561.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g26850.3 |
-3 |
4e-15 |
71 |
34/38 (89%) |
13111.m02571 protein erythronate-4-phosphate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT4G13940.4 |
-3 |
6e-29 |
107 |
53/59 (90%) |
| Symbols: HOG1, SAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056763 FORWARD LENGTH=325 |