MLOC_25528 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.218239.642351.014944.219
LEAShoots from the seedlings (10 cm shoot stage)35.65833.233837.826333.9909
INF1Young developing inflorescences (5mm)42.108337.304344.102737.2853
INF2Developing inflorescences (1-1.5 cm)35.396757.191158.511259.7599
ROORoots from the seedlings (10 cm shoot stage)25.226533.434431.704843.1617
NODDeveloping tillers at six leaf stage, 3rd internode50.879651.787349.3495193.359
CAR5Developing grain, bracts removed (5 DPA)53.268853.924144.792552.53
CAR15Developing grain, bracts removed (15 DPA)25.723224.744232.05665.5834



CDS Structure of MLOC_25528






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK356234
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356234CUST_14032_PI427708083NoneNoneNone
MLOC_25528.2NoneAvailableAvailablecontig_169809 (Mapped)
MLOC_27210.1NoneAvailableNonecontig_1814446 (Not mapped)
MLOC_30319.1NoneAvailableNonecontig_2083633 (Not mapped)
MLOC_30772.1NoneAvailableNonecontig_2124992 (Not mapped)
MLOC_31009.1NoneAvailableNonecontig_2148808 (Mapped)
MLOC_33942.1NoneAvailableNonecontig_2416069 (Not mapped)
MLOC_798.1NoneAvailableNonecontig_1062277 (Mapped)
MLOC_79936.1NoneAvailableNonecontig_877566 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----