MLOC_25483 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.120360.20298900
LEAShoots from the seedlings (10 cm shoot stage)00.3818720.3448620
INF1Young developing inflorescences (5mm)0.1006190.10792100
INF2Developing inflorescences (1-1.5 cm)0.2121090.3700080.2598240
ROORoots from the seedlings (10 cm shoot stage)00.12336900
NODDeveloping tillers at six leaf stage, 3rd internode0.08347630.4623250.303280
CAR5Developing grain, bracts removed (5 DPA)0.9682641.118080.849430
CAR15Developing grain, bracts removed (15 DPA)0.6532290.1009790.8426670



CDS Structure of MLOC_25483






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK374097
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374097CUST_14388_PI427708083NoneNoneNone
MLOC_25483.1NoneAvailableNonecontig_16944 (Mapped)
MLOC_26378.1NoneAvailableNonecontig_17521 (Not mapped)
MLOC_30241.1NoneAvailableNonecontig_20765 (Not mapped)
MLOC_31519.1NoneAvailableNonecontig_21978 (Not mapped)
MLOC_36219.7NoneAvailableAvailablecontig_253992 (Not mapped)
MLOC_49639.1NoneAvailableNonecontig_345463 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----