MLOC_25395 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.41142.746744.252660
LEAShoots from the seedlings (10 cm shoot stage)4.58316000
INF1Young developing inflorescences (5mm)9.6035412.97812.61240
INF2Developing inflorescences (1-1.5 cm)2.212056.321182.822990
ROORoots from the seedlings (10 cm shoot stage)16.4967000
NODDeveloping tillers at six leaf stage, 3rd internode14.37724.796134.24410
CAR5Developing grain, bracts removed (5 DPA)5.755034.828745.554390
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_25395






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355954
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355954CUST_19592_PI427708080NoneNoneNone
MLOC_13443.1NoneAvailableNonecontig_156566 (Mapped)
MLOC_22928.1NoneAvailableAvailablecontig_1614189 (Mapped)
MLOC_25395.1NoneAvailableNonecontig_1688849 (Mapped)
MLOC_25396.1NoneAvailableNonecontig_1688850 (Not mapped)
MLOC_29016.1NoneAvailableNonecontig_1966754 (Mapped)
MLOC_31643.1NoneAvailableNonecontig_220893 (Not mapped)
MLOC_54775.1NoneAvailableNonecontig_393912 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----