MLOC_25343 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.527124.331728.205331.676
LEAShoots from the seedlings (10 cm shoot stage)9.608116.2640811.06728.66452
INF1Young developing inflorescences (5mm)3.864364.6353.976214.16236
INF2Developing inflorescences (1-1.5 cm)2.315252.280532.681912.9804
ROORoots from the seedlings (10 cm shoot stage)42.754329.968221.01442.8958
NODDeveloping tillers at six leaf stage, 3rd internode29.158236.64317.202125.218
CAR5Developing grain, bracts removed (5 DPA)16.941116.321413.894917.6819
CAR15Developing grain, bracts removed (15 DPA)0.5139090.9272350.3405411.74558



CDS Structure of MLOC_25343






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248370.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248370.1CUST_18549_PI427708080NoneNoneNone
MLOC_25343.1NoneAvailableAvailablecontig_168543 (Mapped)
MLOC_49213.1NoneAvailableNonecontig_337808 (Not mapped)
MLOC_50161.1NoneAvailableNonecontig_355628 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----