MLOC_25314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.09635710.3027870.10833
LEAShoots from the seedlings (10 cm shoot stage)0.3606650.35728800.199452
INF1Young developing inflorescences (5mm)0.2514440.4005120.2521070.242482
INF2Developing inflorescences (1-1.5 cm)0.6112520.2575270.5041740.459693
ROORoots from the seedlings (10 cm shoot stage)0.09172920.2498040.1764020.269068
NODDeveloping tillers at six leaf stage, 3rd internode0.1403590.220460.1303320.688877
CAR5Developing grain, bracts removed (5 DPA)0.1884180.3378760.5394550.332216
CAR15Developing grain, bracts removed (15 DPA)0.1101190.06883590.1626070.215972



CDS Structure of MLOC_25314






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25314.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25314.2CUST_3661_PI427708083AvailableAvailablecontig_168363 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g46210.1 -3 2e-123 363 187/283 (66%) 13111.m04625 protein NB-ARC domain containing protein, expressed
TAIR PP10 AT3G46730.1 -3 3e-32 129 78/260 (30%) NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847