MLOC_25313 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.263466.483584.865654.42704
LEAShoots from the seedlings (10 cm shoot stage)8.246645.195665.372154.76644
INF1Young developing inflorescences (5mm)10.94679.0305814.28567.62196
INF2Developing inflorescences (1-1.5 cm)14.441615.304412.502212.8503
ROORoots from the seedlings (10 cm shoot stage)3.21295.928578.576075.36729
NODDeveloping tillers at six leaf stage, 3rd internode4.026844.129024.9327410.9757
CAR5Developing grain, bracts removed (5 DPA)3.810652.747033.11012.4381
CAR15Developing grain, bracts removed (15 DPA)2.620981.774232.839564.4456



CDS Structure of MLOC_25313






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25313.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25313.8CUST_11831_PI427708083AvailableAvailablecontig_168363 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g31460.1 +2 5e-20 92 47/57 (82%) 13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10 AT1G78010.1 +2 4e-16 79 40/57 (70%) tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560