- Predicted Gene MLOC_25299
MLOC_25299 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.0286 | 32.7324 | 30.3457 | 35.2701 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.5475 | 14.6965 | 16.1829 | 16.2537 |
| INF1 | Young developing inflorescences (5mm) | 50.1855 | 47.6727 | 48.1045 | 42.3608 |
| INF2 | Developing inflorescences (1-1.5 cm) | 46.4619 | 43.5987 | 48.3371 | 52.1552 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.486 | 32.4792 | 31.6625 | 39.6723 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.17306 | 6.82791 | 10.6899 | 25.6967 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.364 | 40.4548 | 37.6415 | 39.6366 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.4732 | 18.8119 | 15.1888 | 43.379 |
CDS Structure of MLOC_25299
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25299.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g10190.1 |
+1 |
0.0 |
761 |
386/442 (87%) |
13103.m01136 protein seryl-tRNA synthetase, putative, expressed |
| TAIR PP10 |
AT5G27470.1 |
+1 |
0.0 |
643 |
318/454 (70%) |
seryl-tRNA synthetase / serine--tRNA ligase | chr5:9695087-9697154 FORWARD LENGTH=451 |