MLOC_25248 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.968410.32428.689780
LEAShoots from the seedlings (10 cm shoot stage)16.173717.160616.76060
INF1Young developing inflorescences (5mm)13.554218.627623.47390
INF2Developing inflorescences (1-1.5 cm)23.606421.442123.24370
ROORoots from the seedlings (10 cm shoot stage)18.643811.882211.88370
NODDeveloping tillers at six leaf stage, 3rd internode12.944318.650419.80620
CAR5Developing grain, bracts removed (5 DPA)12.597213.751212.61760
CAR15Developing grain, bracts removed (15 DPA)10.26558.682228.792910



CDS Structure of MLOC_25248






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366111
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366111CUST_21235_PI427708080NoneNoneNone
MLOC_10864.1NoneAvailableNonecontig_155995 (Mapped)
MLOC_25248.1NoneAvailableNonecontig_1680006 (Not mapped)
MLOC_2630.1NoneAvailableNonecontig_1234930 (Not mapped)
MLOC_28342.1NoneAvailableNonecontig_190993 (Not mapped)
MLOC_30676.1NoneAvailableNonecontig_2117877 (Not mapped)
MLOC_30856.1NoneAvailableNonecontig_2133488 (Not mapped)
MLOC_40829.1NoneAvailableNonecontig_256529 (Mapped)
MLOC_46423.1NoneAvailableNonecontig_29007 (Not mapped)
MLOC_49059.1NoneAvailableNonecontig_33468 (Not mapped)
MLOC_49267.1NoneAvailableNonecontig_338798 (Mapped)
MLOC_52892.1NoneAvailableNonecontig_378873 (Not mapped)
MLOC_54702.1NoneAvailableNonecontig_393235 (Mapped)
MLOC_70914.1NoneAvailableAvailablecontig_58773 (Mapped)
MLOC_78399.1NoneAvailableNonecontig_800647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----