- Predicted Gene MLOC_25218
MLOC_25218 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 40.3719 | 40.1221 | 39.6895 | 41.5106 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.734 | 31.3294 | 32.7301 | 24.7135 |
| INF1 | Young developing inflorescences (5mm) | 63.4771 | 65.4012 | 61.3251 | 57.4039 |
| INF2 | Developing inflorescences (1-1.5 cm) | 47.3545 | 46.1737 | 46.8693 | 54.6889 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 33.5443 | 28.7905 | 28.7273 | 34.4531 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.04 | 10.4991 | 19.7748 | 38.3378 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 57.8624 | 58.7055 | 66.5297 | 64.0926 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 49.3242 | 49.7208 | 39.7915 | 119.35 |
CDS Structure of MLOC_25218
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25218.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g22030.1 |
+3 |
0.0 |
837 |
420/466 (90%) |
13112.m02237 protein serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed |
| TAIR PP10 |
AT4G13930.1 |
+3 |
0.0 |
752 |
374/465 (80%) |
| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471 |