MLOC_25126 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.274811.715292.771492.16978
LEAShoots from the seedlings (10 cm shoot stage)0.7571880.6341510.9646120.737286
INF1Young developing inflorescences (5mm)7.616527.92577.259016.94163
INF2Developing inflorescences (1-1.5 cm)8.265078.215166.120579.08774
ROORoots from the seedlings (10 cm shoot stage)1.435112.701821.692393.17063
NODDeveloping tillers at six leaf stage, 3rd internode0.05247720.09244220.2355340.441403
CAR5Developing grain, bracts removed (5 DPA)3.106234.043.662343.88411
CAR15Developing grain, bracts removed (15 DPA)0.4295250.2448610.1921020.760649



CDS Structure of MLOC_25126






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25126.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25126.1CUST_10281_PI427708080AvailableAvailablecontig_167282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44800.1 -3 3e-158 473 254/320 (79%) 13107.m04716 protein SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed
TAIR PP10 AT5G05130.1 -3 9e-109 344 183/318 (58%) DNA/RNA helicase protein | chr5:1512173-1514918 FORWARD LENGTH=862