- Predicted Gene MLOC_25110
MLOC_25110 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.04607 | 0.355882 | 0.588896 | 0.606921 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.27681 | 5.20896 | 9.59994 | 5.66531 |
| INF1 | Young developing inflorescences (5mm) | 0.250851 | 0.43441 | 0.0461419 | 0.261208 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0412036 | 0 | 0 | 0.0521581 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0594099 | 0 | 0.321759 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0308051 | 0.0200236 | 0.058281 | 0.0849412 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.567041 | 1.12661 | 0.801486 | 1.05965 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.046706 | 0.119567 |
CDS Structure of MLOC_25110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25110.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g50530.1 |
-1 |
3e-47 |
159 |
78/95 (82%) |
13103.m05496 protein expressed protein |
| TAIR PP10 |
AT2G01755.1 |
-1 |
7e-29 |
110 |
54/92 (59%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 120 Blast hits to 120 proteins in 52 species: Archae - 0; Bacteria - 80; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr2:332249-332770 REVERSE LENGTH=173 |