MLOC_25095 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains95.424779.280278.725175.9591
LEAShoots from the seedlings (10 cm shoot stage)72.320929.164837.350138.3023
INF1Young developing inflorescences (5mm)72.315581.697784.742257.1572
INF2Developing inflorescences (1-1.5 cm)71.790385.934381.132777.2945
ROORoots from the seedlings (10 cm shoot stage)53.095269.987356.302671.4246
NODDeveloping tillers at six leaf stage, 3rd internode94.180596.479255.1798261.446
CAR5Developing grain, bracts removed (5 DPA)76.103576.735177.340365.5913
CAR15Developing grain, bracts removed (15 DPA)14.064512.441812.62426.3175



CDS Structure of MLOC_25095






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25095.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25095.1CUST_10278_PI427708080AvailableAvailablecontig_167074 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37750.1 +1 8e-68 232 115/136 (85%) 13107.m03888 protein ATMIN7, putative, expressed
TAIR PP10 AT3G43300.2 +1 7e-42 156 75/136 (55%) | Symbols: ATMIN7 | HOPM interactor 7 | chr3:15234235-15245034 REVERSE LENGTH=1727