- Predicted Gene MLOC_25056
MLOC_25056 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_25056_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_25056_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0848161 | 0.435401 | 0.405095 | 0.214977 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.413577 | 0.0811548 | 0.185007 | 0.176968 |
INF1 | Young developing inflorescences (5mm) | 0.987778 | 1.02793 | 1.38377 | 0.621006 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.06963 | 1.05371 | 1.09602 | 0.844358 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0452649 | 0.610408 | 0.106926 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.70988 | 0.689923 | 0.961789 | 1.82636 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.404636 | 0.360055 | 0.154019 | 0.221713 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0531205 | 0.106258 | 0 | 0.148175 |
CDS Structure of MLOC_25056
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25056.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g49900.1 |
-1 |
1e-19 |
91 |
46/103 (45%) |
13103.m05424 protein zinc finger, C3HC4 type domain containing protein, expressed |
TAIR PP10 |
AT1G18470.1 |
-1 |
6e-13 |
67 |
40/116 (34%) |
Transmembrane Fragile-X-F-associated protein | chr1:6356407-6360057 REVERSE LENGTH=467 |