MLOC_25048 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.338723.0316200
LEAShoots from the seedlings (10 cm shoot stage)2.456091.390672.557060
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.25806300
ROORoots from the seedlings (10 cm shoot stage)17.8482.489334.238130
NODDeveloping tillers at six leaf stage, 3rd internode3.012843.962555.163440
CAR5Developing grain, bracts removed (5 DPA)1.911653.506231.321620
CAR15Developing grain, bracts removed (15 DPA)00.31350800



CDS Structure of MLOC_25048






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365200
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365200CUST_24875_PI427708080NoneNoneNone
MLOC_2454.1NoneAvailableNonecontig_1217746 (Not mapped)
MLOC_25048.1NoneAvailableNonecontig_16682 (Mapped)
MLOC_25921.2NoneAvailableNonecontig_1722065 (Not mapped)
MLOC_46704.1NoneAvailableNonecontig_294484 (Not mapped)
MLOC_62449.1NoneAvailableAvailablecontig_46584 (Not mapped)
MLOC_76140.1NoneAvailableNonecontig_702681 (Not mapped)
MLOC_79259.1NoneAvailableNonecontig_841611 (Not mapped)
MLOC_80552.1NoneAvailableNonecontig_912847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----