- Predicted Gene MLOC_25039
MLOC_25039 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_25039_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_25039_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.1024 | 10.6746 | 8.01506 | 10.9176 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.55726 | 5.35597 | 7.54356 | 6.10051 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.567357 | 0 | 1.09195 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.2476 | 22.0239 | 32.1614 | 34.2915 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0509461 | 0.198792 | 0.529322 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_25039
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_25039.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g08990.1 |
+3 |
6e-36 |
124 |
60/65 (92%) |
13108.m00942 protein Cupin domain containing protein, expressed |
TAIR PP10 |
AT5G39120.1 |
+3 |
4e-22 |
87 |
41/66 (62%) |
RmlC-like cupins superfamily protein | chr5:15662705-15663486 REVERSE LENGTH=221 |