MLOC_25039 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.102410.67468.0150610.9176
LEAShoots from the seedlings (10 cm shoot stage)6.557265.355977.543566.10051
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.56735701.09195
ROORoots from the seedlings (10 cm shoot stage)42.247622.023932.161434.2915
NODDeveloping tillers at six leaf stage, 3rd internode00.05094610.1987920.529322
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_25039






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25039.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25039.1CUST_3613_PI427708083AvailableAvailablecontig_16675 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08990.1 +3 6e-36 124 60/65 (92%) 13108.m00942 protein Cupin domain containing protein, expressed
TAIR PP10 AT5G39120.1 +3 4e-22 87 41/66 (62%) RmlC-like cupins superfamily protein | chr5:15662705-15663486 REVERSE LENGTH=221