MLOC_25033 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.074081.077081.445141.08644
LEAShoots from the seedlings (10 cm shoot stage)1.705720.3360740.6626270.78872
INF1Young developing inflorescences (5mm)2.200581.116542.83291.71108
INF2Developing inflorescences (1-1.5 cm)3.699911.925921.692482.80743
ROORoots from the seedlings (10 cm shoot stage)2.707251.796291.910871.89371
NODDeveloping tillers at six leaf stage, 3rd internode1.924951.230343.674853.86251
CAR5Developing grain, bracts removed (5 DPA)0.6263790.8773311.139690.861392
CAR15Developing grain, bracts removed (15 DPA)1.801310.307581.197762.84915



CDS Structure of MLOC_25033






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25033.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25033.1CUST_3612_PI427708083AvailableAvailablecontig_1667142 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g16130.1 -2 4e-25 99 58/76 (76%) 13108.m01724 protein fiber protein Fb34, putative, expressed
TAIR PP10 AT1G68220.1 -2 7e-12 61 38/80 (48%) Protein of unknown function (DUF1218) | chr1:25570322-25571562 FORWARD LENGTH=201