MLOC_25024 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.4811480
LEAShoots from the seedlings (10 cm shoot stage)00.63118500
INF1Young developing inflorescences (5mm)0.2743070.3072490.3622320
INF2Developing inflorescences (1-1.5 cm)0.9595591.634470.6053530
ROORoots from the seedlings (10 cm shoot stage)01.1366300
NODDeveloping tillers at six leaf stage, 3rd internode00.1615840.4595670
CAR5Developing grain, bracts removed (5 DPA)0.30124600.3127390
CAR15Developing grain, bracts removed (15 DPA)0.8473620.313021.647350



CDS Structure of MLOC_25024






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369875CUST_25387_PI427708080NoneNoneNone
MLOC_1648.1NoneAvailableNonecontig_1145962 (Not mapped)
MLOC_1974.1NoneAvailableAvailablecontig_117571 (Mapped)
MLOC_25022.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25024.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25919.1NoneAvailableNonecontig_1721789 (Mapped)
MLOC_29187.1NoneAvailableNonecontig_1983382 (Mapped)
MLOC_29861.1NoneAvailableNonecontig_2043605 (Not mapped)
MLOC_34779.1NoneAvailableNonecontig_2445668 (Not mapped)
MLOC_36273.1NoneAvailableNonecontig_2543495 (Not mapped)
MLOC_37299.1NoneAvailableNonecontig_2548130 (Mapped)
MLOC_42646.1NoneAvailableNonecontig_2655842 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----