MLOC_25023 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.126530.10770300.139109
LEAShoots from the seedlings (10 cm shoot stage)0.51985500.3847760.393724
INF1Young developing inflorescences (5mm)0.2637980.3895860.4479750.339861
INF2Developing inflorescences (1-1.5 cm)0.7700240.7276030.3153640.716893
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.1792540.1492120.703197
CAR5Developing grain, bracts removed (5 DPA)0.4269870.09805970.2155650.262546
CAR15Developing grain, bracts removed (15 DPA)0.4500030.1984710.656331.10837



CDS Structure of MLOC_25023






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_25023.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_25023.1CUST_10271_PI427708080AvailableAvailablecontig_166666 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g27120.1 -3 2e-52 178 80/181 (44%) 13102.m02948 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----