MLOC_24978 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.103875000.128303
ROORoots from the seedlings (10 cm shoot stage)00.12041100.729061
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)000.2211340.49591
CAR15Developing grain, bracts removed (15 DPA)0.8209770.1835170.2424391.24252



CDS Structure of MLOC_24978






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24978.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24978.1CUST_11819_PI427708083AvailableAvailablecontig_166441 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g28210.1 +3 3e-21 85 40/44 (91%) 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed
TAIR PP10 AT2G40170.1 +3 1e-17 75 32/44 (73%) | Symbols: ATEM6, GEA6, EM6 | Stress induced protein | chr2:16779792-16780167 REVERSE LENGTH=92