MLOC_24966 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.3596660.505053
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.11444800.139261
INF2Developing inflorescences (1-1.5 cm)0.1103640.10252600.159977
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.3335210.2258281.45652
CAR5Developing grain, bracts removed (5 DPA)00.727140.493360.604952
CAR15Developing grain, bracts removed (15 DPA)0.089610.1026090.2610330.486723



CDS Structure of MLOC_24966






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24966.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24966.1CUST_3602_PI427708083AvailableAvailablecontig_166370 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61130.1 -2 3e-26 104 54/65 (83%) 13103.m06718 protein phosphoesterase family protein, putative, expressed
TAIR PP10 AT1G07230.1 -2 5e-15 72 39/65 (60%) | Symbols: NPC1 | non-specific phospholipase C1 | chr1:2220509-2222778 REVERSE LENGTH=533