MLOC_24931 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.859770.940542.041211.38985
LEAShoots from the seedlings (10 cm shoot stage)1.6516500.6372051.0186
INF1Young developing inflorescences (5mm)1.549071.26471.637681.30227
INF2Developing inflorescences (1-1.5 cm)1.820350.6007351.188721.33963
ROORoots from the seedlings (10 cm shoot stage)2.944881.575020.936811.88553
NODDeveloping tillers at six leaf stage, 3rd internode0.3136180.3734213.028832.5311
CAR5Developing grain, bracts removed (5 DPA)0.8734921.023370.436610.835377
CAR15Developing grain, bracts removed (15 DPA)0.6907560.9813590.2531091.84165



CDS Structure of MLOC_24931






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24931.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24931.1CUST_3593_PI427708083AvailableAvailablecontig_166180 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g54000.1 -3 5e-29 83 36/42 (86%) 13103.m05915 protein oligopeptide transporter, putative, expressed
TAIR PP10 AT4G16370.1 -3 9e-27 80 35/42 (83%) | Symbols: ATOPT3, OPT3 | oligopeptide transporter | chr4:9247514-9250071 REVERSE LENGTH=737