MLOC_2492 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_2492_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_2492_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.41465 | 1.49919 | 1.38321 | 1.2947 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.90025 | 0.127954 | 0.0506444 | 0.331841 |
INF1 | Young developing inflorescences (5mm) | 5.99212 | 8.50132 | 8.50345 | 5.31959 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.927 | 1.21484 | 0.815626 | 1.35769 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.880412 | 1.46098 | 1.72049 | 1.463 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.133457 | 0.0761506 | 0.118706 | 0.26057 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.468949 | 0.455321 | 0.423085 | 0.387069 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.39767 | 0.120633 | 0.52671 | 0.636682 |
CDS Structure of MLOC_2492
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2492.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g11830.1 |
-2 |
0.0 |
586 |
304/543 (56%) |
13106.m01284 protein hAT dimerisation domain-containing protein, putative, expressed |
TAIR PP10 |
AT1G19260.1 |
-2 |
2e-124 |
388 |
212/543 (39%) |
TTF-type zinc finger protein with HAT dimerisation domain | chr1:6657260-6659569 REVERSE LENGTH=769 |