MLOC_2491 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_2491_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_2491_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.166267 | 0.142048 | 0.235618 | 0.17514 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.346983 | 0.190547 | 0.381405 | 0.278927 |
INF1 | Young developing inflorescences (5mm) | 0.274171 | 0.620354 | 0.535767 | 0.406165 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.495183 | 0.488315 | 0.498762 | 0.557206 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.297826 | 0.185859 | 0.321809 | 0.255276 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.135265 | 0.121244 | 0.123438 | 0.367687 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.360715 | 0.31956 | 0.426763 | 0.359753 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.187684 | 0.266647 | 0.192419 | 0.516789 |
CDS Structure of MLOC_2491
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2491.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g28480.1 |
-2 |
5e-44 |
166 |
93/161 (58%) |
13106.m02937 protein polygalacturonase inhibitor 1 precursor, putative, expressed |
TAIR PP10 |
AT1G33710.1 |
+2 |
5e-16 |
79 |
48/131 (37%) |
RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr1:12219657-12220289 FORWARD LENGTH=210 |