MLOC_24874 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.839681.373390.9854921.55468
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)2.1059301.396931.86883
ROORoots from the seedlings (10 cm shoot stage)00.1850310.4630890.433041
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.050270300.0792997
CAR15Developing grain, bracts removed (15 DPA)58.013434.190223.293110.624



CDS Structure of MLOC_24874






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24874.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24874.2CUST_17610_PI427708080AvailableAvailablecontig_165952 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g28210.1 +1 3e-39 135 82/95 (86%) 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed
TAIR PP10 AT2G40170.1 +1 3e-31 114 65/91 (71%) | Symbols: ATEM6, GEA6, EM6 | Stress induced protein | chr2:16779792-16780167 REVERSE LENGTH=92