MLOC_24844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7898870.3813091.075230.651823
LEAShoots from the seedlings (10 cm shoot stage)00.16120600.219424
INF1Young developing inflorescences (5mm)0.1250340.2148370.10150.126644
INF2Developing inflorescences (1-1.5 cm)0.5241270.06930980.04911190.241712
ROORoots from the seedlings (10 cm shoot stage)0.3373540.09469830.4240310.220084
NODDeveloping tillers at six leaf stage, 3rd internode0.034549700.04746970.0453975
CAR5Developing grain, bracts removed (5 DPA)0.4137640.1669520.1468870.222407
CAR15Developing grain, bracts removed (15 DPA)1661.49959.6871258.993019.6



CDS Structure of MLOC_24844






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24844.1CUST_10249_PI427708080AvailableAvailablecontig_165807 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g31070.1 -3 4e-16 77 57/150 (38%) 13106.m03216 protein PROLM24 - Prolamin precursor, expressed
TAIR PP10None-----