MLOC_24637 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.262986.609954.374455.81043
LEAShoots from the seedlings (10 cm shoot stage)3.213772.053121.735831.99803
INF1Young developing inflorescences (5mm)6.5107111.58169.001817.3303
INF2Developing inflorescences (1-1.5 cm)3.294374.491834.523654.2536
ROORoots from the seedlings (10 cm shoot stage)4.920332.557583.98023.5953
NODDeveloping tillers at six leaf stage, 3rd internode0.08616820.3936460.06032131.08621
CAR5Developing grain, bracts removed (5 DPA)13.766713.925311.609911.9832
CAR15Developing grain, bracts removed (15 DPA)2.16274.387173.685126.82164



CDS Structure of MLOC_24637






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24637.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24637.2CUST_3541_PI427708083AvailableAvailablecontig_1649736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72710.1 -2 2e-50 171 93/104 (89%) 13101.m07926 protein expressed protein
TAIR PP10 AT5G12470.1 -2 2e-45 157 76/101 (75%) Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386