- Predicted Gene MLOC_24602
MLOC_24602 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_24602_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_24602_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.78276 | 4.40807 | 3.6316 | 3.82862 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.54991 | 10.0256 | 8.09579 | 7.96389 |
INF1 | Young developing inflorescences (5mm) | 7.65548 | 6.57742 | 5.91064 | 5.69313 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.70897 | 5.15217 | 4.99239 | 5.48278 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.864814 | 1.39999 | 0.858547 | 1.59285 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0356547 | 0.0385777 | 0.061313 | 0.145967 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.19569 | 5.38096 | 5.22028 | 4.97226 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.799923 | 0.743107 | 0.497105 | 1.6609 |
CDS Structure of MLOC_24602
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_24602.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g38980.1 |
+2 |
0.0 |
922 |
519/570 (91%) |
13109.m03902 protein T-complex protein, putative, expressed |
TAIR PP10 |
AT2G28000.1 |
+2 |
0.0 |
606 |
325/533 (61%) |
| Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha | chr2:11926603-11929184 FORWARD LENGTH=586 |