MLOC_24602 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.782764.408073.63163.82862
LEAShoots from the seedlings (10 cm shoot stage)9.5499110.02568.095797.96389
INF1Young developing inflorescences (5mm)7.655486.577425.910645.69313
INF2Developing inflorescences (1-1.5 cm)4.708975.152174.992395.48278
ROORoots from the seedlings (10 cm shoot stage)0.8648141.399990.8585471.59285
NODDeveloping tillers at six leaf stage, 3rd internode0.03565470.03857770.0613130.145967
CAR5Developing grain, bracts removed (5 DPA)4.195695.380965.220284.97226
CAR15Developing grain, bracts removed (15 DPA)0.7999230.7431070.4971051.6609



CDS Structure of MLOC_24602






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24602.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24602.2CUST_10223_PI427708080AvailableAvailablecontig_164881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38980.1 +2 0.0 922 519/570 (91%) 13109.m03902 protein T-complex protein, putative, expressed
TAIR PP10 AT2G28000.1 +2 0.0 606 325/533 (61%) | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha | chr2:11926603-11929184 FORWARD LENGTH=586