MLOC_24593 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.9382750.1101780.649316
LEAShoots from the seedlings (10 cm shoot stage)0.5193150.5280320.8819830.550866
INF1Young developing inflorescences (5mm)0.4995450.642520.6215250.443298
INF2Developing inflorescences (1-1.5 cm)2.552910.66620.9221271.44168
ROORoots from the seedlings (10 cm shoot stage)00.5415390.2449170.71494
NODDeveloping tillers at six leaf stage, 3rd internode0.4004250.4340490.04132921.14929
CAR5Developing grain, bracts removed (5 DPA)1.407490.6713841.223380.957031
CAR15Developing grain, bracts removed (15 DPA)0.9469370.2445090.6959681.37409



CDS Structure of MLOC_24593






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24593.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24593.1CUST_3534_PI427708083AvailableAvailablecontig_1648380 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g10540.1 +2 1e-45 164 93/235 (40%) 13108.m01124 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----