MLOC_24572 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.1487.9080700
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)11.8513.039.227590
INF2Developing inflorescences (1-1.5 cm)15.868220.99727.17890
ROORoots from the seedlings (10 cm shoot stage)0031.81970
NODDeveloping tillers at six leaf stage, 3rd internode03.979322.388370
CAR5Developing grain, bracts removed (5 DPA)0014.20160
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_24572






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367944
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367944CUST_25179_PI427708080NoneNoneNone
MLOC_20085.1NoneAvailableAvailablecontig_1587958 (Mapped)
MLOC_22748.1NoneAvailableNonecontig_161140 (Mapped)
MLOC_23273.1NoneAvailableNonecontig_16200 (Mapped)
MLOC_2420.2NoneAvailableNonecontig_1215070 (Not mapped)
MLOC_24572.1NoneAvailableNonecontig_1647934 (Mapped)
MLOC_27420.1NoneAvailableNonecontig_183056 (Not mapped)
MLOC_3051.1NoneAvailableNonecontig_1274195 (Not mapped)
MLOC_31617.1NoneAvailableNonecontig_2205597 (Not mapped)
MLOC_34277.1NoneAvailableNonecontig_2431736 (Not mapped)
MLOC_47594.1NoneAvailableNonecontig_308687 (Not mapped)
MLOC_48361.1NoneAvailableNonecontig_322117 (Mapped)
MLOC_62871.1NoneAvailableNonecontig_470503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----