MLOC_2454 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.890611.551882.34640
LEAShoots from the seedlings (10 cm shoot stage)4.8035602.746020
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)001.302030
ROORoots from the seedlings (10 cm shoot stage)37.77831.566894.676910
NODDeveloping tillers at six leaf stage, 3rd internode13.76243.966844.402650
CAR5Developing grain, bracts removed (5 DPA)1.207711.058723.81780
CAR15Developing grain, bracts removed (15 DPA)03.1997900



CDS Structure of MLOC_2454






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365200
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365200CUST_24875_PI427708080NoneNoneNone
MLOC_2454.1NoneAvailableNonecontig_1217746 (Not mapped)
MLOC_25048.1NoneAvailableNonecontig_16682 (Mapped)
MLOC_25921.2NoneAvailableNonecontig_1722065 (Not mapped)
MLOC_46704.1NoneAvailableNonecontig_294484 (Not mapped)
MLOC_62449.1NoneAvailableAvailablecontig_46584 (Not mapped)
MLOC_76140.1NoneAvailableNonecontig_702681 (Not mapped)
MLOC_79259.1NoneAvailableNonecontig_841611 (Not mapped)
MLOC_80552.1NoneAvailableNonecontig_912847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----