- Predicted Gene MLOC_24448
MLOC_24448 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_24448_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_24448_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 176.262 | 156.383 | 175.012 | 179.277 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 52.9584 | 9.5284 | 15.0926 | 20.8397 |
INF1 | Young developing inflorescences (5mm) | 0.671271 | 0.291188 | 0.212076 | 0.450932 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.2648 | 0.171338 | 0.509189 | 0.570456 |
ROO | Roots from the seedlings (10 cm shoot stage) | 85.185 | 62.3249 | 62.2067 | 81.625 |
NOD | Developing tillers at six leaf stage, 3rd internode | 251.764 | 88.4827 | 26.5962 | 170.362 |
CAR5 | Developing grain, bracts removed (5 DPA) | 108.978 | 106.07 | 109.321 | 125.529 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.26882 | 1.13198 | 0.976493 | 3.31474 |
CDS Structure of MLOC_24448
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_24448.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g45920.1 |
+2 |
7e-75 |
234 |
108/118 (92%) |
13103.m04936 protein tubulin/FtsZ domain containing protein, putative, expressed |
TAIR PP10 |
AT5G44340.1 |
+2 |
2e-71 |
224 |
104/118 (88%) |
| Symbols: TUB4 | tubulin beta chain 4 | chr5:17859442-17860994 REVERSE LENGTH=444 |