MLOC_24419 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains337.983265.31228.381286.203
LEAShoots from the seedlings (10 cm shoot stage)127.83100.2282.928183.8051
INF1Young developing inflorescences (5mm)341.939349.537326.557328.883
INF2Developing inflorescences (1-1.5 cm)282.473204.019165.829272.851
ROORoots from the seedlings (10 cm shoot stage)165.825188.49241.367238.728
NODDeveloping tillers at six leaf stage, 3rd internode18.67616.5638230.821333.134
CAR5Developing grain, bracts removed (5 DPA)104.171129.006114.322134.359
CAR15Developing grain, bracts removed (15 DPA)32.264137.270925.885590.9969



CDS Structure of MLOC_24419






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24419.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24419.1CUST_11801_PI427708083AvailableAvailablecontig_1644579 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g04290.1 -3 2e-17 74 35/41 (85%) 13106.m00382 protein S10/S20 domain containing ribosomal protein, putative, expressed
TAIR PP10None-----