MLOC_24253 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.6420.855918.07519.4151
LEAShoots from the seedlings (10 cm shoot stage)4.3450.6530390.4442731.47462
INF1Young developing inflorescences (5mm)68.607973.278461.840261.1851
INF2Developing inflorescences (1-1.5 cm)70.711680.801965.034383.5646
ROORoots from the seedlings (10 cm shoot stage)12.596516.22612.963916.6156
NODDeveloping tillers at six leaf stage, 3rd internode0.3692910.2922990.06432480.618864
CAR5Developing grain, bracts removed (5 DPA)27.989227.055126.388127.1791
CAR15Developing grain, bracts removed (15 DPA)8.559575.558817.5797818.0417



CDS Structure of MLOC_24253






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24253.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24253.1CUST_10200_PI427708080AvailableAvailablecontig_1640861 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12140.1 +2 0.0 850 441/490 (90%) 13103.m01380 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT2G01630.1 +2 0.0 615 313/448 (70%) O-Glycosyl hydrolases family 17 protein | chr2:279541-281955 REVERSE LENGTH=501