- Predicted Gene MLOC_24253
MLOC_24253 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_24253_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_24253_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 19.64 | 20.8559 | 18.075 | 19.4151 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.345 | 0.653039 | 0.444273 | 1.47462 |
INF1 | Young developing inflorescences (5mm) | 68.6079 | 73.2784 | 61.8402 | 61.1851 |
INF2 | Developing inflorescences (1-1.5 cm) | 70.7116 | 80.8019 | 65.0343 | 83.5646 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.5965 | 16.226 | 12.9639 | 16.6156 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.369291 | 0.292299 | 0.0643248 | 0.618864 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.9892 | 27.0551 | 26.3881 | 27.1791 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.55957 | 5.55881 | 7.57978 | 18.0417 |
CDS Structure of MLOC_24253
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_24253.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g12140.1 |
+2 |
0.0 |
850 |
441/490 (90%) |
13103.m01380 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
TAIR PP10 |
AT2G01630.1 |
+2 |
0.0 |
615 |
313/448 (70%) |
O-Glycosyl hydrolases family 17 protein | chr2:279541-281955 REVERSE LENGTH=501 |