MLOC_24179 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.91127.455769.024958.45769
LEAShoots from the seedlings (10 cm shoot stage)7.986647.10599.092165.8779
INF1Young developing inflorescences (5mm)6.304726.796337.961654.69212
INF2Developing inflorescences (1-1.5 cm)5.741936.142855.37975.20977
ROORoots from the seedlings (10 cm shoot stage)20.75038.4017711.65311.1817
NODDeveloping tillers at six leaf stage, 3rd internode10.09469.9677212.73126.9906
CAR5Developing grain, bracts removed (5 DPA)5.856316.804575.880354.79653
CAR15Developing grain, bracts removed (15 DPA)0.6607950.6520140.9543871.26535



CDS Structure of MLOC_24179






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24179.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24179.1NoneAvailableAvailablecontig_163889 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g37490.1 -1 9e-23 102 48/55 (87%) 13108.m03952 protein 14-3-3 protein, putative, expressed
TAIR PP10 AT5G38480.1 -1 4e-20 94 43/53 (81%) | Symbols: GRF3, RCI1 | general regulatory factor 3 | chr5:15410277-15411285 FORWARD LENGTH=255