MLOC_24013 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.768183.064741.923613.22484
LEAShoots from the seedlings (10 cm shoot stage)2.815761.324532.358332.06537
INF1Young developing inflorescences (5mm)8.87999.9755310.68198.06052
INF2Developing inflorescences (1-1.5 cm)10.29328.526557.679949.74313
ROORoots from the seedlings (10 cm shoot stage)1.445413.005731.954623.55712
NODDeveloping tillers at six leaf stage, 3rd internode0.690631.076141.769374.47349
CAR5Developing grain, bracts removed (5 DPA)6.322524.059056.136275.12838
CAR15Developing grain, bracts removed (15 DPA)0.8350631.176260.7779762.06825



CDS Structure of MLOC_24013






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_24013.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_24013.1CUST_3452_PI427708083AvailableAvailablecontig_163447 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g26160.1 -1 6e-24 102 67/87 (77%) 13101.m02769 protein exportin 1, putative, expressed
TAIR PP10 AT3G05040.1 -1 1e-12 67 35/52 (67%) | Symbols: HST, HST1 | ARM repeat superfamily protein | chr3:1401479-1408095 REVERSE LENGTH=1202