MLOC_2401 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.452135.200644.26240
LEAShoots from the seedlings (10 cm shoot stage)16.898216.721414.40680
INF1Young developing inflorescences (5mm)21.808518.707926.58830
INF2Developing inflorescences (1-1.5 cm)13.579413.02858.048420
ROORoots from the seedlings (10 cm shoot stage)19.917.928720.06250
NODDeveloping tillers at six leaf stage, 3rd internode5.627410.09466.898860
CAR5Developing grain, bracts removed (5 DPA)19.544721.388217.05350
CAR15Developing grain, bracts removed (15 DPA)6.090274.663885.399420



CDS Structure of MLOC_2401






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369831
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369831CUST_21854_PI427708080NoneNoneNone
MLOC_2401.1NoneAvailableNonecontig_121358 (Mapped)
MLOC_49364.1NoneAvailableNonecontig_340405 (Mapped)
MLOC_66349.1NoneAvailableAvailablecontig_51428 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----