MLOC_240 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.472249000.417886
LEAShoots from the seedlings (10 cm shoot stage)4.534734.559042.491183.61302
INF1Young developing inflorescences (5mm)0.41952502.519681.03946
INF2Developing inflorescences (1-1.5 cm)1.034831.241240.4582871.13261
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.3534151.260481.54424.09557
CAR5Developing grain, bracts removed (5 DPA)0.43309200.9200350.734827
CAR15Developing grain, bracts removed (15 DPA)00.43280600.964459



CDS Structure of MLOC_240






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_240.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_240.1CUST_10175_PI427708080AvailableAvailablecontig_1016140 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g27370.1 -2 2e-12 62 29/76 (38%) 13110.m02351 protein transposon protein, putative, Pong sub-class, expressed
TAIR PP10None-----