- Predicted Gene MLOC_23973
MLOC_23973 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_23973_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_23973_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 147.991 | 72.8618 | 77.204 | 77.8753 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.7284 | 4.5457 | 9.40998 | 17.8392 |
INF1 | Young developing inflorescences (5mm) | 176.934 | 222.479 | 222.749 | 137.776 |
INF2 | Developing inflorescences (1-1.5 cm) | 93.8923 | 144.237 | 111.807 | 114.696 |
ROO | Roots from the seedlings (10 cm shoot stage) | 89.6421 | 48.7291 | 84.4333 | 55.8451 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.462601 | 0.906108 | 0.533753 | 2.60007 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.574 | 35.4944 | 33.7709 | 29.1647 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.996871 | 1.93804 | 1.71134 | 4.25361 |
CDS Structure of MLOC_23973
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23973.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38560.1 |
-1 |
5e-14 |
67 |
34/34 (100%) |
13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
TAIR PP10 |
AT3G09480.1 |
-1 |
7e-14 |
66 |
33/34 (97%) |
Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126 |