MLOC_23917 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.0394721.23614.63540
LEAShoots from the seedlings (10 cm shoot stage)11.98199.528326.579570
INF1Young developing inflorescences (5mm)44.931233.974134.97230
INF2Developing inflorescences (1-1.5 cm)30.414824.658628.38170
ROORoots from the seedlings (10 cm shoot stage)4.1525313.240314.82480
NODDeveloping tillers at six leaf stage, 3rd internode2.492310.9267312.557470
CAR5Developing grain, bracts removed (5 DPA)14.378816.517218.4350
CAR15Developing grain, bracts removed (15 DPA)5.754975.303373.245720



CDS Structure of MLOC_23917






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248191.1CUST_18517_PI427708080NoneNoneNone
MLOC_11750.1NoneAvailableNonecontig_1561759 (Mapped)
MLOC_23917.1NoneAvailableNonecontig_1632235 (Mapped)
MLOC_39955.2NoneAvailableNonecontig_2555618 (Not mapped)
MLOC_40000.1NoneAvailableAvailablecontig_2555765 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----