MLOC_23890 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.4814510.37057.810590
LEAShoots from the seedlings (10 cm shoot stage)16.77059.264478.145010
INF1Young developing inflorescences (5mm)7.087987.774548.127720
INF2Developing inflorescences (1-1.5 cm)6.62166.428537.86460
ROORoots from the seedlings (10 cm shoot stage)3.30656.181943.059590
NODDeveloping tillers at six leaf stage, 3rd internode18.607417.973812.21970
CAR5Developing grain, bracts removed (5 DPA)6.44446.282616.969210
CAR15Developing grain, bracts removed (15 DPA)1.317350.7678210.8729040



CDS Structure of MLOC_23890






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376001
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376001CUST_22940_PI427708080NoneNoneNone
MLOC_23890.1NoneAvailableNonecontig_163183 (Mapped)
MLOC_26308.1NoneAvailableNonecontig_174833 (Not mapped)
MLOC_62384.2NoneAvailableAvailablecontig_46511 (Mapped)
MLOC_9193.1NoneAvailableNonecontig_149930 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----