MLOC_23760 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.288820.186622.795720.5151
LEAShoots from the seedlings (10 cm shoot stage)0.1496590.5575880.5076150.378226
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0243219000.0299982
ROORoots from the seedlings (10 cm shoot stage)7.986581.176372.080612.74771
NODDeveloping tillers at six leaf stage, 3rd internode0.07071130.04745640.00867890.137294
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.07680550.085624300.291508



CDS Structure of MLOC_23760






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23760.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364077NoneNoneNoneNone
AK369944NoneNoneNoneNone
MLOC_23760.1CUST_2038_PI427708080AvailableAvailablecontig_162921 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38710.1 +3 1e-95 297 143/226 (63%) 13110.m03526 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT1G10370.1 +3 5e-61 205 101/217 (47%) | Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathione S-transferase family protein | chr1:3397274-3398273 REVERSE LENGTH=227