MLOC_23712 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.590510.283210.39619.37172
LEAShoots from the seedlings (10 cm shoot stage)8.133366.824146.943725.46466
INF1Young developing inflorescences (5mm)7.87736.30667.061395.43179
INF2Developing inflorescences (1-1.5 cm)5.612516.213696.221865.87509
ROORoots from the seedlings (10 cm shoot stage)7.9602810.62227.324119.51581
NODDeveloping tillers at six leaf stage, 3rd internode8.98537.445486.8767618.7135
CAR5Developing grain, bracts removed (5 DPA)12.207912.073313.588810.7023
CAR15Developing grain, bracts removed (15 DPA)3.512573.639262.97467.31981



CDS Structure of MLOC_23712






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23712.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251921.1NoneNoneNoneNone
MLOC_23712.1CUST_2037_PI427708080AvailableAvailablecontig_162818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07010.1 -2 0.0 802 442/519 (85%) 13107.m00679 protein glucosyltransferase, putative, expressed
TAIR PP10 AT5G38460.2 -2 4e-175 514 298/525 (57%) ALG6, ALG8 glycosyltransferase family | chr5:15398592-15400987 REVERSE LENGTH=533