MLOC_23676 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.5315310.751511.88658.17106
LEAShoots from the seedlings (10 cm shoot stage)7.782366.602619.87295.73189
INF1Young developing inflorescences (5mm)16.393216.244215.965111.3378
INF2Developing inflorescences (1-1.5 cm)11.232310.418511.19929.35621
ROORoots from the seedlings (10 cm shoot stage)10.22089.9410411.43589.36828
NODDeveloping tillers at six leaf stage, 3rd internode11.43219.184698.2423322.3628
CAR5Developing grain, bracts removed (5 DPA)20.746220.741921.097115.1049
CAR15Developing grain, bracts removed (15 DPA)7.302216.398827.1101912.9544



CDS Structure of MLOC_23676






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23676.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359143NoneNoneNoneNone
MLOC_23676.3CUST_171_PI427708083AvailableAvailablecontig_162749 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36920.1 -3 1e-35 144 84/143 (59%) 13109.m03649 protein la domain containing protein, putative, expressed
TAIR PP10 AT5G66100.1 -3 4e-12 70 52/145 (36%) winged-helix DNA-binding transcription factor family protein | chr5:26427639-26429772 FORWARD LENGTH=453