- Predicted Gene MLOC_23676
MLOC_23676 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_23676_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_23676_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 7.53153 | 10.7515 | 11.8865 | 8.17106 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.78236 | 6.60261 | 9.8729 | 5.73189 |
INF1 | Young developing inflorescences (5mm) | 16.3932 | 16.2442 | 15.9651 | 11.3378 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.2323 | 10.4185 | 11.1992 | 9.35621 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.2208 | 9.94104 | 11.4358 | 9.36828 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.4321 | 9.18469 | 8.24233 | 22.3628 |
CAR5 | Developing grain, bracts removed (5 DPA) | 20.7462 | 20.7419 | 21.0971 | 15.1049 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.30221 | 6.39882 | 7.11019 | 12.9544 |
CDS Structure of MLOC_23676
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_23676.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g36920.1 |
-3 |
1e-35 |
144 |
84/143 (59%) |
13109.m03649 protein la domain containing protein, putative, expressed |
TAIR PP10 |
AT5G66100.1 |
-3 |
4e-12 |
70 |
52/145 (36%) |
winged-helix DNA-binding transcription factor family protein | chr5:26427639-26429772 FORWARD LENGTH=453 |