MLOC_23627 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.69680.5525290.9843651.0164
LEAShoots from the seedlings (10 cm shoot stage)2.728282.39332.783442.49472
INF1Young developing inflorescences (5mm)3.278731.621833.915942.36456
INF2Developing inflorescences (1-1.5 cm)2.585242.143362.050282.46003
ROORoots from the seedlings (10 cm shoot stage)0.8862840.6119630.7367150.947264
NODDeveloping tillers at six leaf stage, 3rd internode0.2538410.2906460.692371.37439
CAR5Developing grain, bracts removed (5 DPA)0.4943891.266120.867450.876812
CAR15Developing grain, bracts removed (15 DPA)0.2232460.3751710.1125340.628439



CDS Structure of MLOC_23627






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_23627.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_23627.1CUST_3398_PI427708083AvailableAvailablecontig_1626522 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g40020.1 -1 6e-69 225 106/140 (76%) 13108.m04276 protein selenium binding protein, putative, expressed
TAIR PP10 AT3G05240.1 -1 2e-35 134 60/136 (44%) | Symbols: MEF19 | mitochondrial editing factor 19 | chr3:1493684-1495381 REVERSE LENGTH=565